{"public_papers": [{"id": "41645004", "title": "Cellular quiescence uncouples the proteome from the transcriptome in neural stem cells.", "year": 2026, "journal": "EMBO J"}, {"id": "41747727", "title": "Nuclear speckles enable processing of RNA from GC-rich isochores.", "year": 2026, "journal": "Cell"}, {"id": "41571642", "title": "Meta-unstable mRNAs in activated CD8(+) T cells are defined by interlinked AU-rich elements and m(6)A mRNA methylation.", "year": 2026, "journal": "Nat Commun"}, {"id": "42025161", "title": "Comprehensive RNA-binding protein analyses and deep learning uncover genetic constraints and disease associations in protein-RNA interfaces.", "year": 2026, "journal": "Cell Syst"}], "pipeline_count": 23, "user_count": 515, "sample_count": 11239, "execution_count": 4440, "sample_counts": {"types": {"CLIP": 2452, "ChIP-Seq": 3, "scRNA-Seq": 0, "RNA-Seq": 613, "Ribo-Seq": 4, "Hi-C": 1}, "organisms": {"Human": 2832, "Mouse": 215, "Rat": 17, "Zebrafish": 0, "Drosophila": 3, "Yeast": 0, "E. Coli": 0, "Chicken": 6, "Arabidopsis": 0, "V. Fischeri": 0}}, "news": [{"headline": "You can now use Jupyter notebooks to analyse data.", "date": "2025-07-24", "category": 2}, {"headline": "The scdownstream pipeline is now available.", "date": "2025-07-19", "category": 1}, {"headline": "The default Nextflow version is now 24.04.2.", "date": "2025-07-18", "category": 3}, {"headline": "The Ribo-Seq pipeline is now available.", "date": "2025-07-14", "category": 1}, {"headline": "More filter terms added to advanced search.", "date": "2025-03-03", "category": 2}]}